Getting started¶
Installation¶
PyJibe can be installed via multiple channels:
Windows installer: Download the latest version for your architecture (e.g.
PyJibe_X.Y.Z_win_64bit_setup.exe
for 64bit Windows) from the official release page.macOS: Download the latest version (
PyJibeApp_X.Y.Z.dmg
) from the official release page.Python 3.6 with pip: PyJibe can easily be installed with pip:
pip install pyjibe
To start PyJibe, simply run
python -m pyjibe
or justpyjibe
in a command shell.
Update¶
If you install a newer (or older) version of PyJibe, the previously installed version will be automatically uninstalled.
If you installed pyjibe with pip
, you may upgrade it with:
pip install --upgrade pyjibe
Supported file formats¶
PyJibe relies on the afmformats package. A list of supported file formats can be found here.
How to cite¶
If you use PyJibe in a scientific publication, please consider citing Müller et al., BMC Bioinformatics (2019) [MAM+19].