List of changes in-between PyJibe releases.

version 0.7.3

  • fix: update initial parameters when the user edits the left fitting interval boundary
  • fix: conical indenter model did not work, because of a wrong (and unnecessary) entry in the human_units scheme.

version 0.7.2

  • fix: setting bad fit range lead to ValueError during plotting

version 0.7.1

  • fix: wrong SI units assigend to fit results parameters
  • setup: bump afmformats from 0.9.0 to 0.10.0 (new formats: JPK (.jpk-qi-data), AFM workshop (.csv), NT-MDT (.txt exported by Nova))
  • setup: bump nanite from 1.4.1 to 1.5.2

version 0.7.0

  • feat: add data conversion tool
  • enh: allow to select multiple files when loading data
  • ref: changed order and clarified meaning of options in file menu
  • setup: bump afmformats from 0.7.0 to 0.9.0 (fix HDF5 export, support new file formats)

version 0.6.8

  • setup: bump afmformats from 0.5.1 to 0.7.0 (improved metadata view in info tab)
  • setup: bump nanite from 1.4.1 to 1.5.1 (compatibility to afmformats)
  • enh: fit results and parameter export dialog now supports new groups in afmformats 0.7.0
  • enh: autosave now only stores fit results and rating parameters
  • enh: remember scroll position in info tab

version 0.6.7

  • setup: bump nanite from 1.4.0 to 1.4.1 (baseline is now a free parameter by default)
  • docs: add first tutorial (PAAm gels)

version 0.6.6

  • fix: typo lead to error when using rating threshold

version 0.6.5

  • build: macOS build failed due to PyInstaller issue 4626

version 0.6.4

  • fix: info tab did not display QMap metadata
  • fix: do not fit the entire dataset when applying a rating threshold but take the values from previous ratings
  • fix: deselecting curves of a qmap resulted in ValueError if QMap tab was selected
  • fix: set correct display range for residuals
  • docs: UI section for basics FD analysis
  • build: Windows build broken since 0.5.6

version 0.6.3

  • fix: support JPK data recorded in the “force-modulation” feedback mode (bump afmformats from 0.5.0 to 0.5.1)
  • fix: make sure ancillary parameters are computed from the initial parameters set in the user interface (not from the default model parameters)

version 0.6.2

  • enh: allow to select which metadata is exported
  • fix: do not apply and fit to all before exporting metadata (user may have performed individual fits)
  • setup: bump nanite from 1.3.0 to 1.4.0

version 0.6.1

  • build: workaround for Pyinstaller issue 4626

version 0.6.0

  • feat: initial support for ancillary parameters
  • fix: always display parameter units
  • fix: other minor UI bugs
  • setup: bump afmformats from 0.4.1 to 0.5.0
  • setup: bump nanite from 1.2.4 to 1.3.0

version 0.5.7

  • enh: allow to also set right part of fitting range individually
  • fix: improve layout of FD fitting panel
  • setup: bump nanite from 1.2.3 to 1.2.4 (improved default params)

version 0.5.6

  • setup: bump nanite from 1.2.2 to 1.2.3 (fixes issue with fits not being redone when the user changes an initial parameter)
  • fix: IndexError when editing the fitting range

version 0.5.5

  • maintenance release

version 0.5.4

  • enh: write maximum indentation to statistics file (#3)
  • fix: unicode characters were not read correctly from statistics file by libre office (added UTF-8 BOM)

version 0.5.3

  • enh: improved visualization of meta data parameters in the Info tab
  • setup: bump afmformats from 0.3.0 to 0.4.1
  • setup: bump nanite from 1.2.0 to 1.2.2

version 0.5.2

  • ref: bump nanite to 1.2.0
  • ref: migrate to afmformats (0.3.0)

version 0.5.1

  • fix: missing title in FD window and missing FD number in export menu
  • enh: add help menu with link to docs, about, and software used (#1)
  • docs: add quick guide for importing a nanite training set
  • docs: add black/white logo

version 0.5.0

  • feat: allow to import training sets produced with nanite
  • ref: major code refactoring of force-distance interface and cleanup
  • setup: bump nanite dependency to >=1.1.1

version 0.4.4

version 0.4.3

  • maintenance release (migrate to GitHub infrastructure)
  • experimental macOS builds

version 0.4.2

  • enh: merge training set and regressor selection into scheme selection (prevents confusion for users that are unsure what to choose)
  • enh: user rating is saved during rating, not afterwards
  • enh: rating containers for user rating can be reused explicitly
  • enh: qmap plot now better distinguishes between unavailable and invalid data
  • ref: migrate user rating output to nanite

version 0.4.1

  • fix: autoscaling according to fitting range did not work
  • fix: not possible to load .jpk-force-map files
  • ref: migrate qmap generation to nanite

version 0.4.0

  • migration to GitHub